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Hi. When I copy update files e107 2.2.2 git to the server, I have this message:

menumanager_class.php {HEX}Malware.Expert.generic.eval.file.get.contents.1.UNOFFICIAL FOUND
closed with the note: Github #3901
in Updating by (34 points) 2 4 6
closed by
Difficult one... can be a false positive.

I (pers.) do not have that issue.
Step 1 (did a check myself also) is the adviced 'compare' the files old vs new to each other.
Since about a good month ago this file has had changes.. so yes old vs new are different.

Could be it is a server side issue, or php ( so could be a bug inside file due to your used system; it is a month old (change) and no other reports made...so could be a guess here).

If you have an old one present, overwrite the newer one again ( single file) and see if that triggers....? If yes than this could indeed be a bug.

Helas no further to comment here as options/reasons are too 'broad' .
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